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UCSC Genome Browser
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#	Item
31	Since there are two gaps in the current bovine UMD 3.1 assembly within the region deleted in the JEB calf, we built a local assembly to determine the exact size and gene content of this deleted region. First, a compariso Add to Reading List Source URL: gsejournal.org Language: English BLAT Genomics Genome browser Science Bioinformatics UCSC Genome Browser
32	BioNanoGenomics_LogoLockup_CMYK Add to Reading List Source URL: www.bionanogenomics.com Language: English - Date: 2014-10-27 16:16:36 Genomics Bioinformatics Genetic mapping Genome project Contig Copy-number variation Human genome UCSC Genome Browser Genome Biology Genetics Molecular biology
33	Additional File 6 Structure of orthologous 1p31.1a sequences A UCSC Genome Browser on Human FebGRCh37/hg19) chr1:73,594,860-73,596,110 (1,251 bp) Add to Reading List Source URL: retrovirology.com Language: English Science Biology UCSC Genome Browser DNA Expressed sequence tag Genome browser RefSeq Gene prediction Bioinformatics Biological databases Genomics
34	The UCSC Archaeal Genome Browser Todd M. Lowe ()1, Patricia P. Chan ()1, Kevin L. Schneider2, Katherine S. Pollard3, Robert Baertsch1,4 and Andy Pohl4 Biomolecular Engineering, Universi Add to Reading List Source URL: archaea.ucsc.edu Language: English - Date: 2008-09-03 09:00:49 Genomics Archaea Genetic mapping Halophiles Gene expression Sulfolobus UCSC Genome Browser Genome browser Methanocaldococcus jannaschii Microbiology Biology Bioinformatics
35	GenomicRanges HOWTOs Bioconductor Team Edited: July 2014; Compiled: April 22, 2015 Contents 1 Introduction Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-04-22 22:17:07 Bioinformatics Biological databases Genetics DNA sequencing Bioconductor Ensembl RNA-Seq UCSC Genome Browser Genome browser Biology Science Molecular biology
36	The Gviz User Guide Florian Hahne∗ Edited: January 2014; Compiled: April 16, 2015 Contents 1 Introduction Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-04-16 23:52:58 Software UCSC Genome Browser Genomics DNA Bioconductor Molecular genetics Genome browser Genome project Ensembl Bioinformatics Science Biological databases
37	Open Access Research Jonathan E Allen†, William H Majoros‡, Mihaela Pertea and Steven L Salzberg* Add to Reading List Source URL: www.genomebiology.com Language: English DNA Genomics Mathematical and theoretical biology Gene prediction Intron UCSC Genome Browser GeneMark Exon Genome project Biology Genetics Bioinformatics
38	GenomicRanges HOWTOs Bioconductor Team Edited: July 2014; Compiled: May 1, 2015 Contents 1 Introduction Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-05-07 21:15:55 Bioinformatics Biological databases Genetics DNA sequencing Bioconductor Ensembl RNA-Seq UCSC Genome Browser Genome browser Biology Science Molecular biology
39	GenomeSnip: Fragmenting the Genomic Wheel to augment discovery in cancer research Maulik R. Kamdar1 , Aftab Iqbal1 , Muhammad Saleem2 , Helena F. Deus3 , and Stefan Decker1 1 Add to Reading List Source URL: svn.aksw.org Language: English - Date: 2015-03-09 10:43:30 Genomics Molecular biology Biological databases The Cancer Genome Atlas UCSC Genome Browser Genome browser Human genome Genome project Genome Biology Bioinformatics Genetics
40	Fishing for Genes in the UCSC Browser A Tutorial Rachel Harte <> Mark Diekhans <> University of California, Santa Cruz, CA Version 1.0 Add to Reading List Source URL: genome.ucsc.edu Language: English - Date: 2012-05-24 15:12:27 Genomics Biological databases Gene expression UCSC Genome Browser BLAT Genome project Genome browser UniGene Ensembl Biology Genetics Bioinformatics

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